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#pragma once
// [grid3d.h]: 3D primary virtual grid
//
// -------------------------------------------------------------------------------------------- //
// TO DO:
//
#include "nse-sys.h"
#include "mpi-com3d.h"
#include "cart-sys3d.h"
#include "vecmath.h"
#include "grid-id.h"
#ifndef EXCLUDE_GPU_BRANCH
#include "grid.cuh"
#endif
// use hand-coded openmp array reduction
// in -xy averaging without critical sections
// * - use on Intel Xeon Phi
#define USE_OMP_PAR_REDUCE_IN_AVG_XY
#define USE_GRID3D_BINARY_LOCATE
namespace nse
{
namespace nse_const3d
{
enum nodeType {
nodeU = 0, nodeV = 1, nodeW = 2, nodeC = 3,
nodeUV = 4, nodeUW = 5, nodeVW = 6, nodeUVW = 7
};
}
// --- grid node after averaging
nse_const3d::nodeType avg_node(
const nse_const3d::nodeType node,
const nse_const3d::axisType axis);
// ------------------------------------------------------------------------------------------------ //
// * 3D primart grid: Grid3d< T > [ T = float, double ] * //
// =======================================================================
template< typename T, memType mem = memCPU >
class Grid3d
{
public:
Grid3d();
Grid3d(const Grid3d& grid);
virtual ~Grid3d();
// grid parameters by axis
int dim_size(const nse_const3d::axisType axis) const;
int mpi_dim_size(const nse_const3d::axisType axis) const;
int ghost_region_size( // single layer //
const nse_const3d::axisType axis) const;
// MPI global cell index [== -1 - on failure]
virtual int mpi_locate_x(const T x) const = 0;
virtual int mpi_locate_y(const T y) const = 0;
virtual int mpi_locate_z(const T z) const = 0;
// local cell index [== -1 - on failure]
// - only one MPI process returns >=0 for (x,y,z) calls
virtual int locate_x(const T x) const;
virtual int locate_y(const T y) const;
virtual int locate_z(const T z) const;
// local local cell index on single MPI process [== -1 - on failure]
// - searching in segment [iexp - iwidth, iexp + iwdith]
virtual int locate_local_x(const T x, const int iexp, const int iwidth) const;
virtual int locate_local_y(const T y, const int jexp, const int jwidth) const;
virtual int locate_local_z(const T z, const int kexp, const int kwidth) const;
// * search for a list of coordinates
virtual void locate_local_x(const T* _RESTRICT const x,
int* _RESTRICT iexp, const int iwidth, const int n) const;
virtual void locate_local_y(const T* _RESTRICT const y,
int* _RESTRICT jexp, const int jwidth, const int n) const;
virtual void locate_local_z(const T* _RESTRICT const z,
int* _RESTRICT kexp, const int kwidth, const int n) const;
// (i,j,k) MPI-local coordinates [input - global index]
// - only one MPI process returns >= 0
virtual int i_local_coord(const int i) const;
virtual int j_local_coord(const int j) const;
virtual int k_local_coord(const int k) const;
// interpolation (local relative to (x,y,z) position in processor domain)
virtual T c_interp(const T* X, const T x, const T y, const T z) const = 0;
virtual T u_interp(const T* U, const T x, const T y, const T z) const = 0;
virtual T v_interp(const T* V, const T x, const T y, const T z) const = 0;
virtual T w_interp(const T* W, const T x, const T y, const T z) const = 0;
// local interpolation on single MPI process
// [unsafe] - not checking if coordinates [(x,y,z),(i,j,k)] are correct
virtual T u_interp_local(const T* _RESTRICT const U,
const T x, const T y, const T z, const int i, const int j, const int k) const = 0;
virtual T v_interp_local(const T* _RESTRICT const V,
const T x, const T y, const T z, const int i, const int j, const int k) const = 0;
virtual T w_interp_local(const T* _RESTRICT const W,
const T x, const T y, const T z, const int i, const int j, const int k) const = 0;
virtual void u_interp_local(T* _RESTRICT uinterp, const T* _RESTRICT const U,
const T* _RESTRICT const x, const T* _RESTRICT const y, const T* _RESTRICT const z,
const int* _RESTRICT const i, const int* _RESTRICT const j, const int* _RESTRICT const k, const int n) const = 0;
virtual void v_interp_local(T* _RESTRICT vinterp, const T* _RESTRICT const V,
const T* _RESTRICT const x, const T* _RESTRICT const y, const T* _RESTRICT const z,
const int* _RESTRICT const i, const int* _RESTRICT const j, const int* _RESTRICT const k, const int n) const = 0;
virtual void w_interp_local(T* _RESTRICT winterp, const T* _RESTRICT const W,
const T* _RESTRICT const x, const T* _RESTRICT const y, const T* _RESTRICT const z,
const int* _RESTRICT const i, const int* _RESTRICT const j, const int* _RESTRICT const k, const int n) const = 0;
// interpolation (global to (x,y,z) point position)
virtual T mpi_c_interp(const T* X, const T x, const T y, const T z) const;
virtual T mpi_u_interp(const T* U, const T x, const T y, const T z) const;
virtual T mpi_v_interp(const T* V, const T x, const T y, const T z) const;
virtual T mpi_w_interp(const T* W, const T x, const T y, const T z) const;
// slicing
// -xy slice, [C,U,V,W] -> [C,U,V,C]
void c_slice_at_z(T* Pxy, const T* X, const T z) const;
void u_slice_at_z(T* Pxy, const T* U, const T z) const;
void v_slice_at_z(T* Pxy, const T* V, const T z) const;
void w_slice_at_z(T* Pxy, const T* W, const T z) const;
// -xz slice, [C,U,V,W] -> [C,U,C,W]
void c_slice_at_y(T* Pxz, const T* X, const T y) const;
void u_slice_at_y(T* Pxz, const T* U, const T y) const;
void v_slice_at_y(T* Pxz, const T* V, const T y) const;
void w_slice_at_y(T* Pxz, const T* W, const T y) const;
// -yz slice [C,U,V,W] -> [C,C,V,W]
void c_slice_at_x(T* Pyz, const T* X, const T x) const;
void u_slice_at_x(T* Pyz, const T* U, const T x) const;
void v_slice_at_x(T* Pyz, const T* V, const T x) const;
void w_slice_at_x(T* Pyz, const T* W, const T x) const;
// MPI gather-scatter by axis //
template< memType memOUT = memCPU, memType memIN = memCPU, typename Tin >
void mpi_gather(Tin* _RESTRICT out, const Tin* _RESTRICT in,
const int host, const nse_const3d::axisType axis) const;
template< memType memOUT = memCPU, memType memIN = memCPU, typename Tin >
void mpi_scatter(Tin* _RESTRICT out, const Tin* _RESTRICT in,
const int host, const nse_const3d::axisType axis) const;
// MPI gather coordinates //
template< memType memOUT = memCPU >
void mpi_gather_center_coord(T* _RESTRICT out,
const int host, const nse_const3d::axisType axis) const;
template< memType memOUT = memCPU >
void mpi_gather_edge_coord(T* _RESTRICT out,
const int host, const nse_const3d::axisType axis) const;
template< memType memOUT = memCPU >
void mpi_gather_center_coord(
T* _RESTRICT xout, T* _RESTRICT yout, T* _RESTRICT zout, const int host) const;
template< memType memOUT = memCPU >
void mpi_gather_edge_coord(
T* _RESTRICT xout, T* _RESTRICT yout, T* _RESTRICT zout, const int host) const;
// grid re-interpolation out(current grid), in(input grid)
virtual void grid_reinterp(T* Xout, const T* Xin, // local in array //
const nse_const3d::nodeType node, const GridId< T >& id) const = 0;
// GridId on 3D grids //
virtual void set_id(GridId< T >& id) const;
virtual bool check_id(const GridId< T >& id) const;
bool check_id_dims(const GridId< T >& id) const;
virtual void set_id(GridId< T >& id, const nse_const3d::axisType axis) const;
virtual bool check_id(const GridId< T >& id, const nse_const3d::axisType axis) const;
bool check_id_dims(const GridId< T >& id, const nse_const3d::axisType axis) const;
public:
mpiCom3d mpi_com;
int size, nx, ny, nz, nyz;
int mpi_nx, mpi_ny, mpi_nz,
mpi_nxy, mpi_nxz, mpi_nyz, mpi_size;
int gcx, gcy, gcz;
T x, y, z;
T length, width, height;
T mpi_x, mpi_y, mpi_z;
T mpi_length, mpi_width, mpi_height;
T *px, *py, *pz; // cell-center coordinates //
T *ex, *ey, *ez; // cell-edge coordinates //
};
}
// Implementation [misc]
// -------------------------------------------------------------------------------------------- //
inline
nse::nse_const3d::nodeType nse::avg_node(const nse_const3d::nodeType node,
const nse_const3d::axisType axis)
{
if (axis == nse_const3d::axisX) {
if ((node == nse_const3d::nodeU) || (node == nse_const3d::nodeUV) ||
(node == nse_const3d::nodeUW) || (node == nse_const3d::nodeUVW))
return nse_const3d::nodeU;
return nse_const3d::nodeC;
}
if (axis == nse_const3d::axisY) {
if ((node == nse_const3d::nodeV) || (node == nse_const3d::nodeUV) ||
(node == nse_const3d::nodeVW) || (node == nse_const3d::nodeUVW))
return nse_const3d::nodeV;
return nse_const3d::nodeC;
}
if (axis == nse_const3d::axisZ) {
if ((node == nse_const3d::nodeW) || (node == nse_const3d::nodeUW) ||
(node == nse_const3d::nodeVW) || (node == nse_const3d::nodeUVW))
return nse_const3d::nodeW;
return nse_const3d::nodeC;
}
if (axis == nse_const3d::axisXY) {
if ((node == nse_const3d::nodeV) || (node == nse_const3d::nodeVW))
return nse_const3d::nodeV;
if ((node == nse_const3d::nodeU) || (node == nse_const3d::nodeUW))
return nse_const3d::nodeU;
if ((node == nse_const3d::nodeUV) || (node == nse_const3d::nodeUVW))
return nse_const3d::nodeUV;
return nse_const3d::nodeC;
}
if (axis == nse_const3d::axisXZ) {
if ((node == nse_const3d::nodeW) || (node == nse_const3d::nodeVW))
return nse_const3d::nodeW;
if ((node == nse_const3d::nodeU) || (node == nse_const3d::nodeUV))
return nse_const3d::nodeU;
if ((node == nse_const3d::nodeUW) || (node == nse_const3d::nodeUVW))
return nse_const3d::nodeUW;
return nse_const3d::nodeC;
}
if (axis == nse_const3d::axisYZ) {
if ((node == nse_const3d::nodeW) || (node == nse_const3d::nodeUW))
return nse_const3d::nodeW;
if ((node == nse_const3d::nodeV) || (node == nse_const3d::nodeUV))
return nse_const3d::nodeV;
if ((node == nse_const3d::nodeVW) || (node == nse_const3d::nodeUVW))
return nse_const3d::nodeVW;
return nse_const3d::nodeC;
}
// axis == nse_const3d::axisXYZ
return node;
}
// -------------------------------------------------------------------------------------------- //
// Implementation, Grid3d:
// -------------------------------------------------------------------------------------------- //
namespace nse
{
template< typename T, memType mem >
Grid3d< T, mem > ::Grid3d(
) : mpi_com(),
size(0), nx(0), ny(0), nz(0), nyz(0),
mpi_size(0), mpi_nx(0), mpi_ny(0), mpi_nz(0),
mpi_nxy(0), mpi_nxz(0), mpi_nyz(0),
gcx(0), gcy(0), gcz(0),
x((T)0), y((T)0), z((T)0),
length((T)0), width((T)0), height((T)0),
mpi_x((T)0), mpi_y((T)0), mpi_z((T)0),
mpi_length((T)0), mpi_width((T)0), mpi_height((T)0)
{
}
template< typename T, memType mem >
Grid3d< T, mem > ::Grid3d(
const Grid3d< T, mem >& grid)
: mpi_com(grid.mpi_com),
size(grid.size), nx(grid.nx), ny(grid.ny), nz(grid.nz), nyz(grid.nyz),
mpi_size(grid.size), mpi_nx(grid.mpi_nx), mpi_ny(grid.mpi_ny), mpi_nz(grid.mpi_nz),
mpi_nxy(grid.mpi_nxy), mpi_nxz(grid.mpi_nxz), mpi_nyz(grid.mpi_nyz),
gcx(grid.gcx), gcy(grid.gcy), gcz(grid.gcz),
x(grid.x), y(grid.y), z(grid.z),
mpi_x(grid.mpi_x), mpi_y(grid.mpi_y), mpi_z(grid.mpi_z),
length(grid.length), width(grid.width), height(grid.mpi_height),
mpi_length(grid.mpi_length), mpi_width(grid.mpi_width), mpi_height(grid.mpi_height)
{
if (size > 0) {
allocate<mem>(&px, nx); mcopy<mem, mem>(px, grid.px, nx);
allocate<mem>(&py, ny); mcopy<mem, mem>(py, grid.py, ny);
allocate<mem>(&pz, nz); mcopy<mem, mem>(pz, grid.pz, nz);
allocate<mem>(&ex, nx); mcopy<mem, mem>(ex, grid.ex, nx);
allocate<mem>(&ey, ny); mcopy<mem, mem>(ey, grid.ey, ny);
allocate<mem>(&ez, nz); mcopy<mem, mem>(ez, grid.ez, nz);
}
}
template< typename T, memType mem >
Grid3d< T, mem > :: ~Grid3d(
)
{
if (size > 0) {
deallocate<mem>(px); deallocate<mem>(py); deallocate<mem>(pz);
deallocate<mem>(ex); deallocate<mem>(ey); deallocate<mem>(ez);
}
}
template< typename T, memType mem >
int Grid3d< T, mem > ::dim_size(const nse_const3d::axisType axis) const
{
switch (axis)
{
case nse_const3d::axisX: return nx;
case nse_const3d::axisY: return ny;
case nse_const3d::axisZ: return nz;
case nse_const3d::axisXY: return nx * ny;
case nse_const3d::axisXZ: return nx * nz;
case nse_const3d::axisYZ: return nyz;
case nse_const3d::axisXYZ: return size;
default: return -1;
}
}
template< typename T, memType mem >
int Grid3d< T, mem > ::mpi_dim_size(const nse_const3d::axisType axis) const
{
switch (axis)
{
case nse_const3d::axisX: return mpi_nx;
case nse_const3d::axisY: return mpi_ny;
case nse_const3d::axisZ: return mpi_nz;
case nse_const3d::axisXY: return mpi_nxy;
case nse_const3d::axisXZ: return mpi_nxz;
case nse_const3d::axisYZ: return mpi_nyz;
case nse_const3d::axisXYZ: return mpi_size;
default: return -1;
}
}
template< typename T, memType mem >
int Grid3d< T, mem > ::ghost_region_size(const nse_const3d::axisType axis) const
{
switch (axis)
{
case nse_const3d::axisX: return gcx;
case nse_const3d::axisY: return gcy;
case nse_const3d::axisZ: return gcz;
case nse_const3d::axisXY: return gcx * gcy;
case nse_const3d::axisXZ: return gcx * gcz;
case nse_const3d::axisYZ: return gcy * gcz;
case nse_const3d::axisXYZ: return gcx * gcy * gcz;
default: return -1;
}
}
template< typename T, memType mem >
inline int Grid3d< T, mem > ::locate_x(const T _x) const
{
#ifndef EXCLUDE_GPU_BRANCH
if (mem == memGPU) {
if (mpi_com.rank_x == 0)
return nse_gpu::locate(_x, ex, nx, gcx, 0);
else
return nse_gpu::locate(_x, ex, nx, gcx, 1);
}
else
#endif
{ // memCPU //
#ifdef USE_GRID3D_BINARY_LOCATE
const int min_binary_size = 16;
#endif
int i;
int ibeg = gcx, iend = nx - gcx - 1;
if (mpi_com.rank_x == 0)
{
#ifdef USE_GRID3D_BINARY_LOCATE
while (iend - ibeg >= min_binary_size) {
i = (ibeg + iend) / 2;
if (_x < ex[i]) {
iend = i - 1; continue;
}
if (_x > ex[i + 1]) {
ibeg = i + 1; continue;
}
return i;
}
#endif
for (i = ibeg; i <= iend; i++)
if ((_x >= ex[i]) && (_x <= ex[i + 1])) { return i; }
}
else
{
#ifdef USE_GRID3D_BINARY_LOCATE
while (iend - ibeg >= min_binary_size) {
i = (ibeg + iend) / 2;
if (_x <= ex[i]) {
iend = i - 1; continue;
}
if (_x > ex[i + 1]) {
ibeg = i + 1; continue;
}
return i;
}
#endif
for (i = ibeg; i <= iend; i++)
if ((_x > ex[i]) && (_x <= ex[i + 1])) { return i; }
}
return -1;
}
}
template< typename T, memType mem >
inline int Grid3d< T, mem > ::locate_y(const T _y) const
{
#ifndef EXCLUDE_GPU_BRANCH
if (mem == memGPU) {
if (mpi_com.rank_y == 0)
return nse_gpu::locate(_y, ey, ny, gcy, 0);
else
return nse_gpu::locate(_y, ey, ny, gcy, 1);
}
else
#endif
{ // memCPU //
#ifdef USE_GRID3D_BINARY_LOCATE
const int min_binary_size = 16;
#endif
int j;
int jbeg = gcy, jend = ny - gcy - 1;
if (mpi_com.rank_y == 0) {
#ifdef USE_GRID3D_BINARY_LOCATE
while (jend - jbeg >= min_binary_size) {
j = (jbeg + jend) / 2;
if (_y < ey[j]) {
jend = j - 1; continue;
}
if (_y > ey[j + 1]) {
jbeg = j + 1; continue;
}
return j;
}
#endif
for (j = jbeg; j <= jend; j++)
if ((_y >= ey[j]) && (_y <= ey[j + 1])) { return j; }
}
else
{
#ifdef USE_GRID3D_BINARY_LOCATE
while (jend - jbeg >= min_binary_size) {
j = (jbeg + jend) / 2;
if (_y <= ey[j]) {
jend = j - 1; continue;
}
if (_y > ey[j + 1]) {
jbeg = j + 1; continue;
}
return j;
}
#endif
for (j = jbeg; j <= jend; j++)
if ((_y > ey[j]) && (_y <= ey[j + 1])) { return j; }
}
return -1;
}
}
template< typename T, memType mem >
inline int Grid3d< T, mem > ::locate_z(const T _z) const
{
#ifndef EXCLUDE_GPU_BRANCH
if (mem == memGPU) {
if (mpi_com.rank_z == 0)
return nse_gpu::locate(_z, ez, nz, gcz, 0);
else
return nse_gpu::locate(_z, ez, nz, gcz, 1);
}
else
#endif
{ // memCPU //
#ifdef USE_GRID3D_BINARY_LOCATE
const int min_binary_size = 16;
#endif
int k;
int kbeg = gcz, kend = nz - gcz - 1;
if (mpi_com.rank_z == 0) {
#ifdef USE_GRID3D_BINARY_LOCATE
while (kend - kbeg >= min_binary_size) {
k = (kbeg + kend) / 2;
if (_z < ez[k]) {
kend = k - 1; continue;
}
if (_z > ez[k + 1]) {
kbeg = k + 1; continue;
}
return k;
}
#endif
for (k = kbeg; k <= kend; k++)
if ((_z >= ez[k]) && (_z <= ez[k + 1])) { return k; }
}
else
{
#ifdef USE_GRID3D_BINARY_LOCATE
while (kend - kbeg >= min_binary_size) {
k = (kbeg + kend) / 2;
if (_z <= ez[k]) {
kend = k - 1; continue;
}
if (_z > ez[k + 1]) {
kbeg = k + 1; continue;
}
return k;
}
#endif
for (k = kbeg; k <= kend; k++)
if ((_z > ez[k]) && (_z <= ez[k + 1])) { return k; }
}
return -1;
}
}
template< typename T, memType mem >
inline int Grid3d< T, mem > ::locate_local_x(
const T _x, const int iexp, const int iwidth) const
{
#ifdef USE_GRID3D_BINARY_LOCATE
const int min_binary_size = 16;
#endif
int i;
int ibeg = max(iexp - iwidth, gcx);
int iend = min(iexp + iwidth, nx - gcx - 1);
if (mpi_com.rank_x == 0) {
#ifdef USE_GRID3D_BINARY_LOCATE
while (iend - ibeg >= min_binary_size) {
i = (ibeg + iend) / 2;
if (_x < ex[i]) {
iend = i - 1; continue;
}
if (_x > ex[i + 1]) {
ibeg = i + 1; continue;
}
return i;
}
#endif
for (i = ibeg; i <= iend; i++)
if ((_x >= ex[i]) && (_x <= ex[i + 1])) { return i; }
}
else
{
#ifdef USE_GRID3D_BINARY_LOCATE
while (iend - ibeg >= min_binary_size) {
i = (ibeg + iend) / 2;
if (_x <= ex[i]) {
iend = i - 1; continue;
}
if (_x > ex[i + 1]) {
ibeg = i + 1; continue;
}
return i;
}
#endif
for (i = ibeg; i <= iend; i++)
if ((_x > ex[i]) && (_x <= ex[i + 1])) { return i; }
}
return -1;
}
template< typename T, memType mem >
inline int Grid3d< T, mem > ::locate_local_y(
const T _y, const int jexp, const int jwidth) const
{
#ifdef USE_GRID3D_BINARY_LOCATE
const int min_binary_size = 16;
#endif
int j;
int jbeg = max(jexp - jwidth, gcy);
int jend = min(jexp + jwidth, ny - gcy - 1);
if (mpi_com.rank_y == 0) {
#ifdef USE_GRID3D_BINARY_LOCATE
while (jend - jbeg >= min_binary_size) {
j = (jbeg + jend) / 2;
if (_y < ey[j]) {
jend = j - 1; continue;
}
if (_y > ey[j + 1]) {
jbeg = j + 1; continue;
}
return j;
}
#endif
for (j = jbeg; j <= jend; j++)
if ((_y >= ey[j]) && (_y <= ey[j + 1])) { return j; }
}
else
{
#ifdef USE_GRID3D_BINARY_LOCATE
while (jend - jbeg >= min_binary_size) {
j = (jbeg + jend) / 2;
if (_y <= ey[j]) {
jend = j - 1; continue;
}
if (_y > ey[j + 1]) {
jbeg = j + 1; continue;
}
return j;
}
#endif
for (j = jbeg; j <= jend; j++)
if ((_y > ey[j]) && (_y <= ey[j + 1])) { return j; }
}
return -1;
}
template< typename T, memType mem >
inline int Grid3d< T, mem > ::locate_local_z(
const T _z, const int kexp, const int kwidth) const
{
#ifdef USE_GRID3D_BINARY_LOCATE
const int min_binary_size = 16;
#endif
int k;
int kbeg = max(kexp - kwidth, gcz);
int kend = min(kexp + kwidth, nz - gcz - 1);
if (mpi_com.rank_z == 0) {
#ifdef USE_GRID3D_BINARY_LOCATE
while (kend - kbeg >= min_binary_size) {
k = (kbeg + kend) / 2;
if (_z < ez[k]) {
kend = k - 1; continue;
}
if (_z > ez[k + 1]) {
kbeg = k + 1; continue;
}
return k;
}
#endif
for (k = kbeg; k <= kend; k++)
if ((_z >= ez[k]) && (_z <= ez[k + 1])) { return k; }
}
else
{
#ifdef USE_GRID3D_BINARY_LOCATE
while (kend - kbeg >= min_binary_size) {
k = (kbeg + kend) / 2;
if (_z <= ez[k]) {
kend = k - 1; continue;
}
if (_z > ez[k + 1]) {
kbeg = k + 1; continue;
}
return k;
}
#endif
for (k = kbeg; k <= kend; k++)
if ((_z > ez[k]) && (_z <= ez[k + 1])) { return k; }
}
return -1;
}
template< typename T, memType mem >
inline void Grid3d< T, mem > ::locate_local_x(const T* _RESTRICT const _x,
int* _RESTRICT ipos, const int iwidth, const int n) const
{
int m, i;
int ibeg, iend, idx;
if (mpi_com.rank_x == 0) {
#pragma omp parallel for private(m, i, ibeg, iend, idx) shared(ipos)
for (m = 0; m < n; m++) {
ibeg = max(ipos[m] - iwidth, gcx);
iend = min(ipos[m] + iwidth, nx - gcx - 1);
idx = -1;
for (i = ibeg; i <= iend; i++)
if ((_x[m] >= ex[i]) && (_x[m] <= ex[i + 1])) { idx = i; break; }
ipos[m] = idx;
}
}
else
{
#pragma omp parallel for private(m, i, ibeg, iend, idx) shared(ipos)
for (m = 0; m < n; m++) {
ibeg = max(ipos[m] - iwidth, gcx);
iend = min(ipos[m] + iwidth, nx - gcx - 1);
idx = -1;
for (i = ibeg; i <= iend; i++)
if ((_x[m] > ex[i]) && (_x[m] <= ex[i + 1])) { idx = i; break; }
ipos[m] = idx;
}
}
}
template< typename T, memType mem >
inline void Grid3d< T, mem > ::locate_local_y(const T* _RESTRICT const _y,
int* _RESTRICT jpos, const int jwidth, const int n) const
{
int m, j;
int jbeg, jend, idx;
if (mpi_com.rank_y == 0) {
#pragma omp parallel for private(m, j, jbeg, jend, idx) shared(jpos)
for (m = 0; m < n; m++) {
jbeg = max(jpos[m] - jwidth, gcy);
jend = min(jpos[m] + jwidth, ny - gcy - 1);
idx = -1;
for (j = jbeg; j <= jend; j++)
if ((_y[m] >= ey[j]) && (_y[m] <= ey[j + 1])) { idx = j; break; }
jpos[m] = idx;
}
}
else
{
#pragma omp parallel for private(m, j, jbeg, jend, idx) shared(jpos)
for (m = 0; m < n; m++) {
jbeg = max(jpos[m] - jwidth, gcy);
jend = min(jpos[m] + jwidth, ny - gcy - 1);
idx = -1;
for (j = jbeg; j <= jend; j++)
if ((_y[m] > ey[j]) && (_y[m] <= ey[j + 1])) { idx = j; break; }
jpos[m] = idx;
}
}
}
template< typename T, memType mem >
inline void Grid3d< T, mem > ::locate_local_z(const T* _RESTRICT const _z,
int* _RESTRICT kpos, const int kwidth, const int n) const
{
int m, k;
int kbeg, kend, idx;
if (mpi_com.rank_z == 0) {
#pragma omp parallel for private(m, k, kbeg, kend, idx) shared(kpos)
for (m = 0; m < n; m++) {
kbeg = max(kpos[m] - kwidth, gcz);
kend = min(kpos[m] + kwidth, nz - gcz - 1);
idx = -1;
for (k = kbeg; k <= kend; k++)
if ((_z[m] >= ez[k]) && (_z[m] <= ez[k + 1])) { idx = k; break; }
kpos[m] = idx;
}
}
else
{
#pragma omp parallel for private(m, k, kbeg, kend, idx) shared(kpos)
for (m = 0; m < n; m++) {
kbeg = max(kpos[m] - kwidth, gcz);
kend = min(kpos[m] + kwidth, nz - gcz - 1);
idx = -1;
for (k = kbeg; k <= kend; k++)
if ((_z[m] > ez[k]) && (_z[m] <= ez[k + 1])) { idx = k; break; }
kpos[m] = idx;
}
}
}
template< typename T, memType mem >
int Grid3d< T, mem > ::i_local_coord(const int i) const
{
if ((i < 0) & (i > mpi_nx - 1)) return -1;
const int shmx = (mpi_com.rank_x == 0) ? gcx : 0;
const int shpx = (mpi_com.rank_x == mpi_com.size_x - 1) ? gcx : 0;
int ip = i - par_local_offset(mpi_nx, gcx,
mpi_com.rank_x, mpi_com.size_x);
return ((ip >= gcx - shmx) && (ip < nx - gcx + shpx)) ? ip : -1;
}
template< typename T, memType mem >
int Grid3d< T, mem > ::j_local_coord(const int j) const
{
if ((j < 0) && (j > mpi_ny - 1)) return -1;
const int shmy = (mpi_com.rank_y == 0) ? gcy : 0;
const int shpy = (mpi_com.rank_y == mpi_com.size_y - 1) ? gcy : 0;
int jp = j - par_local_offset(mpi_ny, gcy,
mpi_com.rank_y, mpi_com.size_y);
return ((jp >= gcy - shmy) && (jp < ny - gcy + shpy)) ? jp : -1;
}
template< typename T, memType mem >
int Grid3d< T, mem > ::k_local_coord(const int k) const
{
if ((k < 0) && (k > mpi_nz - 1)) return -1;
const int shmz = (mpi_com.rank_z == 0) ? gcz : 0;
const int shpz = (mpi_com.rank_z == mpi_com.size_z - 1) ? gcz : 0;
int kp = k - par_local_offset(mpi_nz, gcz,
mpi_com.rank_z, mpi_com.size_z);
return ((kp >= gcz - shmz) && (kp < nz - gcz + shpz)) ? kp : -1;
}
template< typename T, memType mem >
T Grid3d< T, mem > ::mpi_c_interp(const T* X, const T _px, const T _py, const T _pz) const
{
return mpi_allreduce(
c_interp(X, _px, _py, _pz), MPI_SUM, mpi_com.comm);
}
template< typename T, memType mem >
T Grid3d< T, mem > ::mpi_u_interp(const T* U, const T _px, const T _py, const T _pz) const
{
return mpi_allreduce(
u_interp(U, _px, _py, _pz), MPI_SUM, mpi_com.comm);
}
template< typename T, memType mem >
T Grid3d< T, mem > ::mpi_v_interp(const T* V, const T _px, const T _py, const T _pz) const
{
return mpi_allreduce(
v_interp(V, _px, _py, _pz), MPI_SUM, mpi_com.comm);
}
template< typename T, memType mem >
T Grid3d< T, mem > ::mpi_w_interp(const T* W, const T _px, const T _py, const T _pz) const
{
return mpi_allreduce(
w_interp(W, _px, _py, _pz), MPI_SUM, mpi_com.comm);
}
template< typename T, memType mem >
void Grid3d< T, mem >::c_slice_at_z(T* Pxy, const T* X, const T _pz) const
{
int i, j, k = locate_z(_pz);
int index, host_rank = -1;
null(Pxy, nx * ny);
if ((k >= gcz) && (k < nz - gcz)) {
const int kpos = (_pz < pz[k]) ? k : k + 1;
const T alpha = (_pz - pz[kpos - 1]) / (pz[kpos] - pz[kpos - 1]);
#pragma omp parallel for private( i, j, index ) shared( Pxy )
for (i = gcx; i < nx - gcx; i++) {
for (j = gcy; j < ny - gcy; j++) {
index = i * nyz + j * nz + kpos;
Pxy[i * ny + j] = ((T)1.0 - alpha) * X[index - 1] + alpha * X[index];
}
}
MPI_Comm_rank(mpi_com.comm_z, &host_rank);
}
mpi_allreduce(&host_rank, MPI_MAX, mpi_com.comm_z);
if (host_rank >= 0)
mpi_broadcast(Pxy, nx * ny, host_rank, mpi_com.comm_z);
}
template< typename T, memType mem >
void Grid3d< T, mem >::u_slice_at_z(T* Pxy, const T* U, const T _pz) const
{
int i, j, k = locate_z(_pz);
int index, host_rank = -1;
null(Pxy, nx * ny);
if ((k >= gcz) && (k < nz - gcz)) {
const int kpos = (_pz < pz[k]) ? k : k + 1;
const T alpha = (_pz - pz[kpos - 1]) / (pz[kpos] - pz[kpos - 1]);
#pragma omp parallel for private( i, j, index ) shared( Pxy )
for (i = gcx; i < nx - gcx + 1; i++) {
for (j = gcy; j < ny - gcy; j++) {
index = i * nyz + j * nz + kpos;
Pxy[i * ny + j] = ((T)1.0 - alpha) * U[index - 1] + alpha * U[index];
}
}
MPI_Comm_rank(mpi_com.comm_z, &host_rank);
}
mpi_allreduce(&host_rank, MPI_MAX, mpi_com.comm_z);
if (host_rank >= 0)
mpi_broadcast(Pxy, nx * ny, host_rank, mpi_com.comm_z);
}
template< typename T, memType mem >
void Grid3d< T, mem >::v_slice_at_z(T* Pxy, const T* V, const T _pz) const
{
int i, j, k = locate_z(_pz);
int index, host_rank = -1;
null(Pxy, nx * ny);
if ((k >= gcz) && (k < nz - gcz)) {
const int kpos = (_pz < pz[k]) ? k : k + 1;
const T alpha = (_pz - pz[kpos - 1]) / (pz[kpos] - pz[kpos - 1]);
#pragma omp parallel for private( i, j, index ) shared( Pxy )
for (i = gcx; i < nx - gcx; i++) {
for (j = gcy; j < ny - gcy + 1; j++) {
index = i * nyz + j * nz + kpos;
Pxy[i * ny + j] = ((T)1.0 - alpha) * V[index - 1] + alpha * V[index];
}
}
MPI_Comm_rank(mpi_com.comm_z, &host_rank);
}
mpi_allreduce(&host_rank, MPI_MAX, mpi_com.comm_z);
if (host_rank >= 0)
mpi_broadcast(Pxy, nx * ny, host_rank, mpi_com.comm_z);
}
template< typename T, memType mem >
void Grid3d< T, mem >::w_slice_at_z(T* Pxy, const T* W, const T _pz) const
{
int i, j, k = locate_z(_pz);
int index, host_rank = -1;
null(Pxy, nx * ny);
if ((k >= gcz) && (k < nz - gcz))
{
const int kpos = k + 1;
const T alpha = (_pz - ez[kpos - 1]) / (ez[kpos] - ez[kpos - 1]);
#pragma omp parallel for private( i, j, index ) shared( Pxy )
for (i = gcx; i < nx - gcx; i++) {
for (j = gcy; j < ny - gcy; j++) {
index = i * nyz + j * nz + kpos;
Pxy[i * ny + j] = ((T)1.0 - alpha) * W[index - 1] + alpha * W[index];
}
}
MPI_Comm_rank(mpi_com.comm_z, &host_rank);
}