diff --git a/plotter/Plotter.py b/plotter/Plotter.py
index b389d5f19b1f8af31cec4cfd77288c23b13c6c0c..ae249fd76af4a87741cbaa33fb8772db955aed14 100755
--- a/plotter/Plotter.py
+++ b/plotter/Plotter.py
@@ -116,7 +116,7 @@ class Plotter:
self.ndim = 1
elif args.func == self.plot_contour or args.func == self.ani_plot_contour:
self.ndim = 2
- elif args.func == self.avg_plot or args.func == self.slice:
+ elif args.func == self.avg_plot or args.func == self.slice or args.func == self.ani_slice:
self.ndim = 3
if self.var == None and len(self.file_column_names) != 0:
@@ -612,6 +612,114 @@ class Plotter:
else: plt.close(fig)
if self.if_save_result: fig.savefig(self.out + self.fig_names[i] + self.fig_end)
+ def __ani_slice(self):
+ if self.if_save_result:
+ os.system("mkdir -p " + self.out)
+ os.system("mkdir -p " + self.ani_pngs_dir)
+
+ x_name = self.file_column_names[0]
+ y_name = self.file_column_names[1]
+
+ if self.oname == None:
+ fig_names = self.var
+ fig_end = ".gif"
+ else:
+ fig_names = self.oname
+ fig_end = ""
+
+ X = self.file_data[0].data[x_name]
+ Y = self.file_data[0].data[y_name]
+
+ if self.max_y == None:
+ max_val = {var:self.min_max_var_vals[var][1] for var in self.var}
+ else:
+ max_val = {var:self.max_y[i] for var, i in zip(self.var, list(range(len(self.var))))}
+
+ if self.min_y == None:
+ min_val = {var:self.min_max_var_vals[var][0] for var in self.var}
+ else:
+ min_val = {var:self.min_y[i] for var, i in zip(self.var, list(range(len(self.var))))}
+
+ duration = self.ani_period * len(self.filename)
+
+ if self.plane_type == 'xy':
+ x_name = self.file_column_names[0]
+ y_name = self.file_column_names[1]
+
+ z_name = self.file_column_names[2]
+ arr = self.file_data[0].data[z_name]
+ pos = self.__find_closest(arr, self.slice_position)
+
+ elif self.plane_type == 'yz':
+ x_name = self.file_column_names[1]
+ y_name = self.file_column_names[2]
+
+ z_name = self.file_column_names[0]
+ arr = self.file_data[0].data[z_name]
+ pos = self.__find_closest(arr, self.slice_position)
+
+ elif self.plane_type == 'xz':
+ x_name = self.file_column_names[0]
+ y_name = self.file_column_names[2]
+
+ z_name = self.file_column_names[1]
+ arr = self.file_data[0].data[z_name]
+ pos = self.__find_closest(arr, self.slice_position)
+
+ i = 0
+ for var in self.var:
+ if self.title == None:
+ title = var
+ else:
+ title = self.title
+
+ counter = 0
+ png_names = []
+ levels = np.linspace(min_val[var], max_val[var], 30)
+ for data in self.file_data:
+ fig,ax=plt.subplots(1,1)
+
+ if self.title == None:
+ title = self.var
+ else:
+ title = self.title
+
+ if self.plane_type == 'xy':
+ Z = data.data[self.var[i]][pos, :, :]
+
+ elif self.plane_type == 'xz':
+ Z = data.data[self.var[i]][:, pos, :]
+
+ elif self.plane_type == 'yz':
+ Z = data.data[self.var[i]][:, :, pos]
+
+ if self.ifTranspose:
+ cp = ax.contourf(Y, X, Z.T)
+ ax.set_ylabel(x_name)
+ ax.set_xlabel(y_name)
+ else:
+ cp = ax.contourf(X, Y, Z)
+ ax.set_xlabel(x_name)
+ ax.set_ylabel(y_name)
+
+ fig.colorbar(cp) # Add a colorbar to a plot
+ ax.set_title(title)
+ figname = var + str(counter)
+ fig.savefig(self.ani_pngs_dir + figname + '.png')
+ name = self.ani_pngs_dir + figname + '.png'
+ png_names.append(name)
+ counter += 1
+ plt.close(fig)
+
+ images = []
+ for file_name in png_names:
+ images.append(imageio.v2.imread(file_name))
+
+ imageio.mimsave(self.out + fig_names[i] + fig_end, images, duration = 0.25, loop=0)
+ i += 1
+
+ shutil.rmtree(self.ani_pngs_dir)
+
def dump(self):
self.__dump()
@@ -652,4 +760,8 @@ class Plotter:
def slice(self):
self.__get_min_max_bar()
- self.__slice()
\ No newline at end of file
+ self.__slice()
+
+ def ani_slice(self):
+ self.__get_min_max_bar()
+ self.__ani_slice()
\ No newline at end of file
diff --git a/plotter/__init__.py b/plotter/__init__.py
index e84c0030b77b09cb119d55bb2005a2fd6b8fecd7..a6c3798a0c71d43d1d1beb5043e3e5ae13518c4f 100755
--- a/plotter/__init__.py
+++ b/plotter/__init__.py
@@ -8,6 +8,7 @@ from .main import plot_contour
from .main import ani_plot_contour
from .main import avg_plot
from .main import slice
+from .main import ani_slice
from .main import plot_diff
from .main import get_data
from .main import multiple_plot
diff --git a/plotter/main.py b/plotter/main.py
index 81dc849156b59846cb26146af5b3b56da7895e03..089ba36dbd26f631310ac105ab0939ade68a86a0 100755
--- a/plotter/main.py
+++ b/plotter/main.py
@@ -78,6 +78,20 @@ def slice(filename, plane_type = 'xy', slice_position = 0, out = './', oname = [
Plot.set(args, if_manual_plot=manual_plot, if_save_result=save_result)
Plot.slice()
+def ani_slice(filename, plane_type = 'xy', slice_position = 0, out = './', oname = [None], var=[None], mval=[None], min_y = None, max_y = None, ifTranspose=False):
+ pp = str(PurePath(filename).parent) + '/'
+ name = str(PurePath(filename).name )
+ command = 'find ' + pp + ' -name ' + "'" + name + "'"
+ output_stream = os.popen(command)
+ out_res = output_stream.read().split('\n')[0:-1]
+ output_stream.close()
+ names = natsort.natsorted(out_res,reverse=False)
+
+ Plot = Plotter()
+ args = Args(names, Plot.ani_slice, var=var, mval=mval, oname=oname, out=out, plane_type=plane_type, slice_position=slice_position, ifTranspose=ifTranspose)
+ Plot.set(args, if_manual_plot=manual_plot, if_save_result=save_result)
+ Plot.ani_slice()
+
def plot_diff(filename, ndim, out = './', oname = 'fig.png', var=[None], mval=[None], ifTranspose=False):
Plot = Plotter()
args = Args(filename, Plot.plot_diff, var=var, mval=mval, oname=oname, out=out, ndim=ndim, ifTranspose=ifTranspose)